Disease: Malignant neoplasm of breast
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9282861
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 31
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs889312 0.732 0.360 5 56736057 regulatory region variant C/A snv 0.69 13
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 103
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 110
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs828907
XRCC5
0.827 0.160 2 216108009 intron variant G/T snv 0.37 6
rs80358829
BRCA2
0.827 0.120 13 32340327 missense variant C/T snv 6
rs799917
BRCA1
0.708 0.320 17 43092919 missense variant G/A;C;T snv 0.40; 1.6E-05 18
rs7975
GSTZ1
0.763 0.320 14 77326864 stop gained G/A;C;T snv 0.31 0.32 9
rs7972
GSTZ1
0.851 0.120 14 77326894 missense variant G/A snv 7.0E-02 7.0E-02 4
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 79
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27 19
rs775144154
SLC19A1
0.627 0.600 21 45531904 missense variant C/A;T snv 9.7E-06; 1.4E-05 38
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 86
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06 41
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs753535070
MUC1
0.851 0.120 1 155187350 missense variant T/C snv 8.0E-06 5
rs752681512
MTRR
0.851 0.120 5 7897088 missense variant A/G snv 2.0E-05 4
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs746702110
OGG1
0.627 0.480 3 9756778 missense variant C/T snv 1.2E-05 2.8E-05 38
rs744154
ERCC4
0.763 0.280 16 13921224 intron variant G/C snv 0.23 11